#!/bin/tcsh
#SBATCH -A cheatham-lp
#SBATCH -p cheatham-lp
#SBATCH -J jc
#SBATCH -o logtest.o%j
#SBATCH -N 1
#SBATCH -n 8
#SBATCH -t 02:00:00


setenv PATH "/uufs/chpc.utah.edu/sys/installdir/openmpi/1.8.4i/bin:$PATH"
if ( -z "${LD_LIBRARY_PATH}" ) then
   setenv LD_LIBRARY_PATH "/uufs/chpc.utah.edu/sys/installdir/openmpi/1.8.4i/lib"
else
   setenv LD_LIBRARY_PATH "/uufs/chpc.utah.edu/sys/installdir/openmpi/1.8.4i/lib:$LD_LIBRARY_PATH"
endif
source /uufs/chpc.utah.edu/common/home/u0827715/Amber/GIT/amber-lonepeak/amber.csh
setenv AMBERHOME /uufs/chpc.utah.edu/common/home/u0827715/Amber/GIT/amber-lonepeak

perl ../../../../../../scripts/jcoupling-ca.perl > avg-jc.dat