#!/bin/tcsh

foreach wat (tip3p opc)
	foreach ff (ff12sb dacP-ff12sb chen-garcia charmm36)
		mkdir -p $wat/$ff/run1/build/
                mkdir -p $wat/$ff/run2/build/
                foreach r (1 2)
		cp ../scripts/mdin ./$wat/$ff/run$r/
		cp ../scripts/foreach_noheat.pl ./$wat/$ff/run$r/
		cp ../scripts/md-git.runit ./$wat/$ff/run$r/
		end
	end
end

cd opc
rm -r chen-garcia
rm -r charmm36
