trajin  GAAC-strip.netcdf

parm /uufs/chpc.utah.edu/common/home/u0181375/dirs/biodata8/cheatham/anton-abc/GAAC/avgpdb/avg_0-10us.pdb
reference parmindex 1 /uufs/chpc.utah.edu/common/home/u0181375/dirs/biodata8/cheatham/anton-abc/GAAC/avgpdb/avg_0-10us.pdb
rms reference mass out rms-reference-Anton-10us :1-36
average avg0.pdb pdb


